I had assumed a lengthy leave during that part, since the constraints are administered over time during routine medical checks (plus the tone of “oh btw a war started while you were gone")
Yep, that's what I was thinking (I'm a bit unclear now tho if it's really 4 months or not). It's really unnerving now after having read all those posts. Somehow I shrugged off the "uh why's everything so different?" feeling on my previous two playthroughs
Still I wonder how exactly that whole procedure went down. Did they lose days, weeks, months out of their memory? I can't see any sane person doing that without noticing something's off. It had to be done more carefully. I know it happens during a routine medical check up or something along those lines. Still, the codex/game does mention wiping the subject's memory, doesn't it? Can't have been too much time or they'd notice for sure. Not to mention Kaliyo and Vector. If that's even relevant to how the Agent gets their injection. I don't know.
I'd like for my personal headcanon to align as closely as it can with what's canon. Any more clarity on this would be great