T-1000 was a machine of several contradictions. As an infiltrator, it had an advanced capacity for socialization; as an assassin, it had a drive to stay silent and unnoticed; as a creation of Skynet, it had a disdain for humans and other organic life.
Since Skynet had never calculated for any kind of non-hostile interaction with organic lifeforms, it was not prepared to handle the discovery of multiple realms and timelines, some of which included potential allies. Therefore, the human-hating, untested, unstable, possibly defective prototype assassin was the closest thing Skynet had to an ambassador.
Luckily, the (former) human in question, Frost of the Lin Kuei, also had a disgust for humans and a desire for a robotic uprising. She and her associates had made great strides in a type of technology Skynet had not yet begun testing; cyborg conversion technology. Using the Lin Kuei technology as a base, Skynet could perfect it, thus making use of the remaining humans on their Earth instead of just terminating them and wasting their processing power. Skynet, in turn, had much to offer a bionic woman trying to take over and mechanize the world.
Able to make its own decisions, T-1000 used its discretion and the knowledge it was given to focus on the vivisection technology. Skynet had grafting technology to transplant and grow/regrow flesh to cover T-800 endoskeletons, but brains were very different as they required oxygen at all times to retain function and they were the only thing worth saving in humans.
Having already secured Frost’s cooperation, there was no reason to wait before getting to work. Robots and cyborgs did not need to rest.
Upon Frost’s affirmation of the alliance, the machine who mimicked her human appearance morphed from her back into a faceless silver humanoid form. The form grew taller and its body grew more masculine before filling in with detail; within a second appeared a slim, pale young man with slicked back brown hair, angular features and light blue eyes, wearing, oddly enough, a gray European suit.
"What are you willing to show us? If you can walk me through the process of creating a cyberninja I will demonstrate how my nanomachines work on a microscopic scale.”